摘 要: 旨在探究豬氨基肽酶N(porcine aminopeptidase N,pAPN)基因敲除的豬空腸上皮細(xì)胞系(intestinal porcine epithelial cell line J2,IPEC-J2)介導(dǎo)豬傳染性胃腸炎病毒(transmissible gastroenteritis virus,TGEV)感染的特征,為深入了解pAPN基因在TGEV感染過程中的作用機(jī)制提供理論依據(jù)。研究分為pAPN基因敲除IPEC-J2組(IPEC-J2-KO組)、野生型IPEC-J2組(IPEC-J2-WT組)和未接種TGEV的野生型IPEC-J2組(Mock組)3組,每組設(shè)置3個(gè)重復(fù)。首先通過實(shí)時(shí)熒光定量PCR(quantitative real-time PCR,qPCR)確定IPEC-J2接種TGEV毒株后收取細(xì)胞樣品的最佳時(shí)間節(jié)點(diǎn);其次,對IPEC-J2-KO進(jìn)行了脫靶效應(yīng)檢測;然后,通過qPCR、蛋白免疫印跡(western blot,WB)、間接免疫熒光分析(indirect immunofluorescence assay,IFA)和50%組織細(xì)胞感染量(50% tissue culture infective dose,TCID50)對接種TGEV的IPEC-J2-KO、IPEC-J2-WT及Mock進(jìn)行感染特征分析;最后,通過WB檢測IPEC-J2-KO、IPEC-J2-WT和Mock中NF-κB p65及其磷酸化蛋白pp65的表達(dá)情況。qPCR結(jié)果顯示,接毒24 h是收集細(xì)胞樣本以評估TGEV對IPEC-J2影響的最佳時(shí)間節(jié)點(diǎn);脫靶分析結(jié)果顯示,在IPEC-J2-KO中未檢測到脫靶效應(yīng);病毒感染特征分析結(jié)果顯示,與IPEC-J2-WT相比,IPEC-J2-KO內(nèi)病毒拷貝數(shù)、病毒滴度均極顯著降低(Plt;0.001),與Mock相比,IPEC-J2-KO內(nèi)病毒拷貝數(shù)、病毒滴度均無顯著差異(Pgt;0.05),且IPEC-J2-KO內(nèi)未檢測到TGEV-N蛋白的表達(dá);此外,與Mock相比,接種TGEV后,IPEC-J2-WT組NF-κB p65的磷酸化水平極顯著上調(diào)(Plt;0.001),而IPEC-J2-KO組無顯著差異(Pgt;0.05)。本研究表明,IPEC-J2-KO可有效抵抗TGEV的感染,接種TGEV未影響IPEC-J2-KO中先天免疫相關(guān)信號通路中轉(zhuǎn)錄因子NF-κB的活性。該研究為IPEC-J2作為TGEV感染特征研究的細(xì)胞模型提供了理論依據(jù),為闡明pAPN基因在TGEV入侵宿主細(xì)胞的機(jī)制及抗病豬新品種的研究奠定了基礎(chǔ)。
關(guān)鍵詞: 豬氨基肽酶N;IPEC-J2;TGEV;NF-κB
中圖分類號:S813.1
文獻(xiàn)標(biāo)志碼:A
文章編號:0366-6964(2024)08-3395-13
收稿日期:2024-01-23
基金項(xiàng)目:深圳市科技計(jì)劃項(xiàng)目(CJGJZD20210408092402006);中國農(nóng)業(yè)科學(xué)院科技創(chuàng)新工程(ASTIP-IAS05)
作者簡介:夏振濤(1999-),男,河南鹿邑人,碩士生,主要從事動(dòng)物遺傳育種與繁殖的研究,E-mail:17093646235@163.com
通信作者:牟玉蓮,主要從事動(dòng)物遺傳育種與繁殖的研究,E-mail:mouyulian@caas.cn
Characteristics Analysis of TGEV Infection Mediated by IPEC-J2 with Knockout of
pAPN Gene
XIA" Zhentao1, WANG" Nan1, WANG" Wanjie1, ZHOU" Qilü1, HUANG" Lei2, MU" Yulian1*
(1.Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193," China;
2.Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen
518120," China)
Abstract:" The aim of this study was to explore the characteristics of porcine transmissible gastroenteritis virus (TGEV) infection mediated by porcine aminopeptidase N (pAPN) gene knockout intestinal porcine epithelial cell line J2 (IPEC-J2) and to provide theoretical basis for further understanding the mechanism of pAPN gene in the process of TGEV infection. The study was divided into 3 groups, pAPN gene knockout IPEC-J2 group (IPEC-J2-KO group), wild-type IPEC-J2 group (IPEC-J2-WT group), and wild-type IPEC-J2 group not inoculated with TGEV (Mock group), with 3 replicates set up in each group. Firstly, quantitative real-time PCR (qPCR) was used to determine the best time point for collecting cell samples following inoculation with TGEV strain. Secondly, the off-target effect of IPEC-J2-KO was detected. Then, the infection characteristics of IPEC-J2-KO, IPEC-J2-WT inoculated with TGEV and Mock were analyzed by qPCR, western blot (WB), indirect immunofluorescence assay (IFA), and 50% tissue culture infective dose (TCID50). Finally, the expression of NF-κB p65 and its phosphorylated protein pp65 in Mock, IPEC-J2-WT and IPEC-J2-KO were detected by WB. The results of qPCR showed that 24 hours after exposure was the best time point to collect cell samples to evaluate the impact of TGEV on IPEC-J2; The off-target analysis results showed that no off-target effects were detected in IPEC-J2-KO; The results of virus infection characteristic analysis showed that the virus copy number and virus titer in IPEC-J2-KO were significantly lower than those in IPEC-J2-WT (Plt;0.001). Compared with the Mock, there was no significant difference in virus copy number and virus titer in IPEC-J2-KO (Pgt;0.05), and no expression of TGEV-N protein was detected in IPEC-J2-KO. In addition, compared with the Mock, after inoculation with TGEV, the phosphorylation level of NF-κB p65 was significantly increased in the IPEC-J2-WT group (Plt;0.001), while there was no significant difference in IPEC-J2-KO group (Pgt;0.05). This study results showed that IPEC-J2-KO can effectively resist TGEV infection, and TGEV did not affect the activity of the transcription factor NF-κB in the innate immunity-related signaling pathway in IPEC-J2-KO. This study provided the evidence that IPEC-J2 could serve as a cell model for the study of TGEV infection characteristics, and laid the foundation for elucidating the mechanism of pAPN gene in TGEV invading host cells and researching new disease-resistant pig varieties.
Key words: porcine aminopeptidase N; IPEC-J2; TGEV; NF-κB
*Corresponding author:MU Yulian, E-mail; mouyulian@caas.cn
豬傳染性胃腸炎(transmissible gastroenteritis,TGE)是由豬傳染性胃腸炎病毒(transmissible gastroenteritis virus,TGEV)誘發(fā)的高度接觸性消化道傳染病,主要導(dǎo)致豬的急性腹瀉、脫水、嘔吐和死亡,2周齡內(nèi)的仔豬感染TGEV的病死率高達(dá)100%,給全球生豬養(yǎng)殖產(chǎn)業(yè)帶來了巨大經(jīng)濟(jì)損失[1]。TGEV首次報(bào)道于1946年[2],隨后TGE在歐洲、亞洲、非洲和南美等許多國家爆發(fā),中國自1958年以來開始有TGE的相關(guān)報(bào)道,TGE在我國豬群中的傳播呈現(xiàn)明顯的季節(jié)性、散發(fā)性和區(qū)域性特點(diǎn)[3]。TGEV是RNA病毒,其基因組具有較高重組性和突變率[4],在中國不同地區(qū)分離了TGEV HN-2012[5]、TGEV HB-1[6]、TGEV NMG[7]和TGEV-FJ[8]等不同株系的突變毒株。同時(shí),流行現(xiàn)狀分析表明,TGEV的隱性感染以及與豬輪狀病毒(porcine rotavirus,PoRV)、豬德爾塔冠狀病毒(porcine deltacoronavirus,PDCoV)等腸道病毒的混合感染現(xiàn)象普遍存在[9-10],使TGE的防治更為困難。研究發(fā)現(xiàn),一種可引發(fā)人類肺炎的新型犬冠狀病毒(CCoV-HuPn-2018)與TGEV Purdue株的全基因組有90%以上的相似性,提示TGE可能存在成為人畜共患病的潛在風(fēng)險(xiǎn)[11-12]。因此,探索TGEV的發(fā)病機(jī)制對于控制TGE的流行具有重要意義。
TGEV屬于冠狀病毒科、α冠狀病毒屬的一員,是一種單股正鏈RNA病毒,其基因組長約28.5 kb[13],病毒基因組結(jié)構(gòu)包括9個(gè)開放閱讀框,編碼了4種不同的結(jié)構(gòu)蛋白,包括核衣殼(N)蛋白、膜(M)蛋白、刺突(S)蛋白和包膜(E)蛋白以及3種輔助蛋白[14]。其中,S蛋白作為病毒表面重要的標(biāo)志蛋白可特異性結(jié)合宿主細(xì)胞表面受體,決定了TGEV的組織嗜性和毒力[15]。氨基肽酶N(aminopeptidase N,APN)是一種II型整合性膜蛋白,又稱白細(xì)胞分化抗原13(cluster of differentiation 13,CD13),以胞外酶形式存在于細(xì)胞膜上[16],是多種冠狀病毒的受體,介導(dǎo)如人巨細(xì)胞病毒(human cytomegalovirus,HCMV)和人冠狀病毒229E(human coronavirus 229E,HCoV-229E)等多種病原體的感染[17-19]。1992年Delmas等[20]通過TGEV中和試驗(yàn)確認(rèn)了pAPN(porcine aminopeptidase N,pAPN)是TGEV入侵宿主的關(guān)鍵受體。研究表明,TGEV的S蛋白可與pAPN相互作用引發(fā)細(xì)胞感染[15]。pAPN基因在非易感細(xì)胞系犬腎細(xì)胞(madin darby canine kidney,MDCK)、非洲綠猴腎細(xì)胞(verda reno,Vero)和倉鼠腎成纖維細(xì)胞(baby hamster kidney-21,BHK-21)中過表達(dá)可使這些細(xì)胞對TGEV易感[21-22]。另有研究表明,利用成簇規(guī)律間隔短回文重復(fù)序列/CRISPR相關(guān)蛋白9(clustered regularly interspaced short palindromic repeats/CRISPR associated protein 9,CRISPR/Cas9)技術(shù)在豬睪丸細(xì)胞(swine testis,ST)與豬回腸上皮細(xì)胞(immortal pig intestinal-2I,IPI-2I)中敲除pAPN基因可顯著抑制TGEV感染[21,23]。Xu等[24]利用CRISPR/Cas9技術(shù)和體細(xì)胞克隆技術(shù)制備的分化抗原163(cluster of differentiation 163,CD163)和pAPN雙基因編輯豬可以抵抗TGEV感染,同時(shí)豬的繁殖和生產(chǎn)性能保持正常。上述研究證實(shí)pAPN是TGEV感染的必需受體。
冠狀病毒感染后,機(jī)體會(huì)產(chǎn)生與控制病毒感染及啟動(dòng)適應(yīng)性免疫反應(yīng)相關(guān)的細(xì)胞因子,參與對外界刺激的響應(yīng),核因子κB(nuclear factor kappa-B,NF-κB)通路被認(rèn)為是一種典型的促炎信號通路[25]。有研究表明,TGEV感染后NF-κB信號通路在多種易感細(xì)胞系,如豬空腸上皮細(xì)胞系(intestinal porcine epithelial cell line J2,IPEC-J2)[26]、ST細(xì)胞[27]和豬腎細(xì)胞(porcine kidney 15,PK15)[28]中被激活。Wang等[27]的研究結(jié)果顯示,TGEV-Nsp2(non-stuctural protein2,nsp2)是參與炎癥調(diào)節(jié)的關(guān)鍵病毒蛋白;Zhou等[28]的研究發(fā)現(xiàn),TGEV-Nsp14(non-stuctural protein14,nsp14)以NF-κB依賴性方式來誘導(dǎo)干擾素β(interferon-β,IFN-β)的產(chǎn)生。Guo等[26]研究發(fā)現(xiàn),TGEV的輔助蛋白ORF3b(open reading frame 3b,ORF3b)可能在感染早期通過抑制NF-κB途徑的激活來保護(hù)宿主細(xì)胞免于死亡,從而有利于TGEV的復(fù)制。上述研究表明,深入研究NF-κB活性在TGEV感染中的作用機(jī)制可為理解TGEV感染的病理生理過程提供思路。
目前,pAPN已被證實(shí)是TGEV的關(guān)鍵受體,且來源于豬空腸的IPEC-J2是了解豬腸道冠狀病毒感染致病機(jī)制的重要細(xì)胞模型[29-31],但pAPN基因敲除的IPEC-J2介導(dǎo)的TGEV感染的特征還未見報(bào)道。本研究利用王曉朋等[32]制備的pAPN基因敲除IPEC-J2,研究其在TGEV感染中的特征,為深入了解pAPN基因在TGEV感染過程中的作用機(jī)制和培育基因編輯抗病豬提供理論依據(jù)。
1 材料與方法
1.1 細(xì)胞與毒株
本研究中野生型IPEC-J2細(xì)胞系(IPEC-J2-WT)由華中農(nóng)業(yè)大學(xué)何啟蓋老師惠贈(zèng),pAPN基因敲除的IPEC-J2細(xì)胞系(IPEC-J2-KO)[32]和豬腎細(xì)胞系(LLC-PK1)為北京畜牧獸醫(yī)研究所動(dòng)物基因工程與種質(zhì)創(chuàng)新團(tuán)隊(duì)提供,TGEV-WH1毒株(GenBank:HQ462571)由華中農(nóng)業(yè)大學(xué)肖少波老師惠贈(zèng)。
1.2 主要試劑
M-PERTM哺乳動(dòng)物蛋白抽提試劑(78501)、胎牛血清(10099-141)、青霉素/鏈霉素(5140-122)、DMEM(12100-046)、0.25% Trypsin-EDTA(25200-072)以及PBS(20012027)均購自賽默飛世爾科技(中國)有限公司;CD13/ANPEP Rabbit mAb(A5662)購自武漢愛博泰克生物科技有限公司;TGEV-N抗體由華中農(nóng)業(yè)大學(xué)肖少波老師惠贈(zèng);GAPDH抗體(2118S)與熒光染料DAPI(sc-3598)購自Santa Cruz Biotechnology;Anti-NF-κB p65 Rabbit pAb(GB 11997—100)與Anti-Phospho-NF-κB p65(S536)Rabbit pAb(GB 113882—100)購自武漢賽維爾生物科技有限公司;RNA-easy Isolation Reagent(R701-01)購自南京諾唯贊生物科技有限公司;反轉(zhuǎn)錄試劑盒(RR047A)購自寶日醫(yī)生物技術(shù)(北京)有限公司;2×RealStar Fast染料法qPCR預(yù)混液(A304-10)購自北京康潤誠業(yè)生物科技有限公司;DyLight 488-山羊抗小鼠IgG(BA1126)購自武漢博士德生物工程有限公司。
1.3 細(xì)胞的培養(yǎng)
LLC-PK1細(xì)胞、IPEC-J2-WT與IPEC-J2-KO細(xì)胞均接種于含有15%胎牛血清、1%青霉素/鏈霉素的DMEM完全培養(yǎng)基中,在37℃和5% CO2的條件下培養(yǎng),當(dāng)細(xì)胞生長約80%的匯合度,使用濃度為0.1%的Trypsin-EDTA消化進(jìn)行細(xì)胞傳代或凍存。
1.4 細(xì)胞接毒試驗(yàn)
本研究中,為確定IPEC-J2接種TGEV最佳時(shí)間節(jié)點(diǎn),設(shè)置接毒0、6、12、24、36與48 h不同時(shí)間處理組,每組設(shè)置3個(gè)重復(fù)。為探究IPEC-J2-KO的感染特征及對NF-κB活性的影響,設(shè)置未接種TGEV的野生型IPEC-J2組(Mock組)、接種TGEV的IPEC-J2-WT組和接種TGEV的IPEC-J2-KO組3組,每組設(shè)置3個(gè)重復(fù)。接毒步驟如下:待細(xì)胞的匯合度達(dá)到約80%,接種TGEV-WH1毒株,感染復(fù)數(shù)(multiplicity of infection,MOI)為1,接毒后于4℃吸附1 h,隨后使用PBS洗去未吸附的TGEV-WH1病毒粒子,在37℃、5% CO2的細(xì)胞培養(yǎng)箱中繼續(xù)培養(yǎng),并于不同時(shí)間點(diǎn)收集細(xì)胞樣品。
1.5 IPEC-J2-KO的脫靶效應(yīng)檢測
為評估IPEC-J2-KO是否存在脫靶,本試驗(yàn)利用CRISPOR(http:∥crispor.tefor.net/)網(wǎng)址對王曉朋等[32]構(gòu)建的IPEC-J2-KO中所使用的向?qū)NA(guide RNA,gRNA)g3與g5的潛在脫靶位點(diǎn)進(jìn)行預(yù)測,每條gRNA各選取8個(gè)潛在脫靶位點(diǎn)進(jìn)行脫靶效應(yīng)檢測(表1),針對上述潛在的脫靶位點(diǎn)設(shè)計(jì)相應(yīng)的擴(kuò)增引物(表2),并對IPEC-J2-WT與IPEC-J2-KO的DNA樣品進(jìn)行PCR擴(kuò)增,PCR產(chǎn)物進(jìn)行Sanger測序,通過對比IPEC-J2-WT與IPEC-J2-KO的DNA序列判斷g3與g5是否存在脫靶效應(yīng)。
1.6 TGEV病毒基因組RNA拷貝數(shù)檢測
實(shí)時(shí)熒光定量PCR(quantitative real-time PCR,qPCR)檢測接毒后IPEC-J2-WT與IPEC-J2-KO中TGEV基因組拷貝數(shù)。提取IPEC-J2-WT與IPEC-J2-KO的RNA,反轉(zhuǎn)錄后得到cDNA,使用檢測引物(TGEV-N-F:5'-GAGTTGTCTGGGTTGCCAAG-3';TGEV-N-R:5'-TGGATTGTTGCCTGCCTCTA-3')進(jìn)行qPCR檢測;反應(yīng)體系為:qPCR預(yù)混液10 μL、ddH2O 7.2 μL、TGEV-N-F 0.4 μL、TGEV-N-R 0.4 μL、cDNA 2 μL;反應(yīng)程序?yàn)椋?5℃預(yù)變性2 min;95℃變性5 s,60℃退火34 s,共40個(gè)循環(huán);95℃ 15 s,60℃ 1 min,95℃ 15 s。將含有TGEV-N端基因的質(zhì)粒作為標(biāo)準(zhǔn)品并按照梯度進(jìn)行稀釋,質(zhì)粒稀釋后拷貝數(shù)分別為:1×109、1×108、1×107、1×106、1×105、1×104(copies·μL-1),根據(jù)稀釋梯度做出相應(yīng)的標(biāo)準(zhǔn)曲線,并以此計(jì)算細(xì)胞樣品中TGEV病毒基因組拷貝數(shù)。
1.7 蛋白免疫印跡(western blot,WB)檢測
提取接毒后IPEC-J2-WT與IPEC-J2-KO的蛋白質(zhì),以GAPDH為內(nèi)參,檢測pAPN、TGEV-N、NF-κB p65與pp65的相對表達(dá)情況。使用BCA法測定細(xì)胞裂解液中蛋白濃度,將細(xì)胞中的蛋白樣品于100℃溫度條件下變性,IPEC-J2蛋白質(zhì)樣品經(jīng)12.5%的聚丙烯酰胺凝膠電泳分離后轉(zhuǎn)至0.45 μm的PVDF膜,使用Western快速封閉液室溫封閉10 min,隨后一抗4℃過夜孵育,二抗室溫孵育45 min,最后使用全自動(dòng)化學(xué)發(fā)光圖像分析系統(tǒng)顯色并拍照。
1.8 間接免疫熒光分析(indirect immunofluorescence assay,IFA)檢測
接種TGEV毒株24 h后,棄去IPEC-J2-WT與IPEC-J2-KO細(xì)胞維持培養(yǎng)液,細(xì)胞經(jīng)固定、透化、封閉后,室溫條件下孵育TGEV-N抗體(1∶500稀釋)1 h,PBS清洗3次后,室溫避光孵育二抗(1∶500稀釋)1 h,PBS清洗3次;室溫避光孵育DAPI(1∶2 000稀釋)15 min,再次使用PBS清洗3次后,于倒置熒光顯微鏡下進(jìn)行觀察,并拍攝圖像。
1.9 50%組織細(xì)胞感染量(50% tissue culture infective dose,TCID50)檢測
待IPEC-J2長至80%的匯合度時(shí),按“1.4”的接毒步驟接種TGEV,24 h后收取細(xì)胞樣品,將樣品置于-80℃低溫下凍結(jié),隨后轉(zhuǎn)移至室溫迅速解凍,反復(fù)凍融3次后離心并過濾,收集TGEV濾液。將收集的TGEV濾液以10倍進(jìn)行梯度稀釋(10-1~10-8),每個(gè)稀釋度設(shè)置8個(gè)重復(fù),稀釋后的病毒濾液接種到培養(yǎng)有LLC-PK1的96孔細(xì)胞培養(yǎng)板中,將細(xì)胞培養(yǎng)物繼續(xù)在37℃、5% CO2的培養(yǎng)箱中培養(yǎng),每隔12 h觀察并記錄96孔細(xì)胞培養(yǎng)板中LLC-PK1的病變孔數(shù),采用Reed-Muench兩氏法計(jì)算病毒滴度,單位為毫升(mL)。
1.10 統(tǒng)計(jì)分析
本研究每個(gè)試驗(yàn)至少進(jìn)行3次重復(fù),結(jié)果均以“平均值±標(biāo)準(zhǔn)誤”表示,試驗(yàn)數(shù)據(jù)采用GraphPad Prism 8.3.0統(tǒng)計(jì)軟件進(jìn)行顯著性差異分析并作圖,用單因素方差分析(One-Way ANOVA)來判斷不同處理間的差異及顯著性,Plt;0.05為差異顯著,Plt;0.01為差異極顯著。
2 結(jié) 果
2.1 TGEV感染IPEC-J2-WT最佳時(shí)間節(jié)點(diǎn)的選擇
為確定TGEV感染IPEC-J2-WT后收取細(xì)胞樣品合適時(shí)間,將IPEC-J2-WT接種TGEV,分別于接毒0、6、12、24、36與48 h時(shí)收集細(xì)胞并提取RNA樣品,qPCR檢測IPEC-J2-WT中TGEV基因組拷貝數(shù)。結(jié)果顯示,TGEV-N基因拷貝數(shù)和Ct值之間的線性關(guān)系為:y=-3.433x+37.958,R2=0.996。接毒后不同時(shí)間收取的細(xì)胞樣品均能檢測到TGEV病毒核酸,與接毒6、12 h細(xì)胞相比,接種TGEV 24 h細(xì)胞的病毒基因組拷貝數(shù)顯著升高(Plt;0.05),接毒24、36、48 h細(xì)胞內(nèi)病毒基因組拷貝數(shù)均處于相同數(shù)量級(106,圖1),表明接毒24 h IPEC-J2-WT中TGEV擴(kuò)增速度較快且基因組拷貝數(shù)較高,故選取接毒24 h作為收取細(xì)胞樣品的最佳時(shí)間節(jié)點(diǎn)。
2.2 IPEC-J2-KO的脫靶檢測分析
本研究以王曉朋等[32]利用CRISPR/Cas9基因編輯技術(shù)制備的IPEC-J2-KO作為試驗(yàn)材料。為確定其是否存在脫靶效應(yīng),針對所使用的g3與g5分別篩選了8個(gè)潛在脫靶位點(diǎn)并設(shè)計(jì)相應(yīng)引物,PCR產(chǎn)物經(jīng)凝膠電泳后進(jìn)行測序。結(jié)果表明,g3與g5各8個(gè)潛在脫靶序列中,IPEC-J2-KO與IPEC-J2-WT的DNA序列均一致,表明IPEC-J2-KO中未出現(xiàn)脫靶效應(yīng)(圖2)。
2.3 IPEC-J2-KO感染特征分析
為了探究IPEC-J2-KO與IPEC-J2-WT的感染特征差異,本研究設(shè)置Mock組、IPEC-J2-WT接毒組和IPEC-J2-KO接毒組進(jìn)行試驗(yàn),從TGEV-N基因拷貝數(shù)、TGEV-N蛋白表達(dá)情況以及TCID50試驗(yàn)3個(gè)方面進(jìn)行驗(yàn)證。
2.3.1 qPCR檢測IPEC-J2-KO中TGEV基因組拷貝數(shù)
為了檢測IPEC-J2-KO對TGEV的抵抗力,qPCR檢測Mock組、IPEC-J2-WT接毒組和IPEC-J2-KO接毒組3組細(xì)胞中TGEV-N基因拷貝數(shù)。結(jié)果顯示,TGEV-N基因拷貝數(shù)和Ct值之間的線性關(guān)系為:y=-3.415x+38.086;R2=0.996。接毒后的IPEC-J2-WT中TGEV-N基因拷貝數(shù)極顯著高于IPEC-J2-KO組(Plt;0.001);與Mock組相比,IPEC-J2-KO中TGEV-N基因拷貝數(shù)無顯著差異(Pgt;0.05,圖3)。結(jié)果表明,接毒后的IPEC-J2-KO可抵抗TGEV感染。
2.3.2 WB檢測IPEC-J2-KO中TGEV-N蛋白表達(dá)
為了評估IPEC-J2-KO對TGEV的抗性,提取Mock組、接毒后的IPEC-J2-WT組和IPEC-J2-KO組中細(xì)胞的蛋白質(zhì),通過WB檢測pAPN及TGEV-N蛋白的表達(dá)情況。結(jié)果顯示,在Mock組和IPEC-J2-WT組均能檢測到pAPN蛋白表達(dá),在IPEC-J2-KO中未檢測到pAPN蛋白,且接毒后的IPEC-J2-WT中可檢測到TGEV-N蛋白表達(dá),而IPEC-J2-KO組中未檢測到TGEV-N蛋白表達(dá)(圖4)。表明IPEC-J2-KO細(xì)胞可抵抗TGEV感染。
2.3.3 IFA檢測TGEV-N蛋白表達(dá)情況
為了進(jìn)一步確認(rèn)IPEC-J2-KO對TGEV的感染特征,對Mock組、IPEC-J2-WT接毒組和IPEC-J2-KO接毒組的細(xì)胞進(jìn)行IFA檢測。結(jié)果顯示,IPEC-J2-WT組中存在大量TGEV-N蛋白陽性細(xì)胞,在Mock組和IPEC-J2-KO組中未檢測到TGEV-N蛋白陽性細(xì)胞(圖5)。表明接毒后的IPEC-J2-KO不存在TGEV-N蛋白的表達(dá),與WB結(jié)果一致。
2.3.4 TCID50檢測IPEC-J2-KO的病毒滴度
為評估TGEV在IPEC-J2-KO中的感染情況,利用LLC-PK1檢測Mock組、接毒后的IPEC-J2-WT組和IPEC-J2-KO組中細(xì)胞的病毒滴度,TCID50測定結(jié)果顯示,IPEC-J2-WT組細(xì)胞中的病毒滴度極顯著高于IPEC-J2-KO組(Plt;0.001);與Mock組相比,IPEC-J2-KO組中的病毒滴度無顯著差異(Pgt;0.05,圖6),這與qPCR、WB及IFA結(jié)果趨勢相符。表明IPEC-J2-KO可有效抵抗TGEV的感染。
2.4 TGEV感染對IPEC-J2中轉(zhuǎn)錄因子NF-κB活性的影響
為了評估TGEV對IPEC-J2中轉(zhuǎn)錄因子NF-κB活性的影響,收取Mock組、IPEC-J2-WT接毒組和IPEC-J2-KO接毒組的細(xì)胞蛋白樣品,通過WB檢測NF-κB p65及其磷酸化蛋白pp65表達(dá)情況。結(jié)果顯示,在Mock組、IPEC-J2-WT組和IPEC-J2-KO組均能檢測到NF-κB p65的表達(dá)(圖7A)。同時(shí),與Mock組相比,IPEC-J2-WT組中NF-κB p65磷酸化水平極顯著的升高(Plt;0.001),而IPEC-J2-KO組無顯著差異(Pgt;0.05,圖7B)。表明接種TGEV可激活I(lǐng)PEC-J2-WT中NF-κB活性,而不影響IPEC-J2-KO的NF-κB活性。
3 討 論
TGEV是一種引起仔豬嚴(yán)重水樣腹瀉的豬腸道冠狀病毒[1],經(jīng)過長期廣泛的傳播,TGEV進(jìn)化出了毒力、傳染性和致病性均較強(qiáng)的突變株[33],并常與多種腸道病毒混合感染[10],嚴(yán)重威脅全球養(yǎng)豬業(yè)的發(fā)展。因此,探究TGEV的致病機(jī)理,闡明該病毒的感染機(jī)制至關(guān)重要。TGEV主要通過消化道和呼吸道入侵機(jī)體,感染會(huì)導(dǎo)致豬空腸損傷,免疫功能受損,并增加致病菌載量[34]。豬空腸IPEC-J2是TGEV易感細(xì)胞系之一,利用IPEC-J2建立的TGEV體外感染模型被廣泛應(yīng)用于豬腸道疾病和感染機(jī)制的研究[31,35-36]。本研究測定了IPEC-J2-WT在接毒后不同時(shí)間點(diǎn)TGEV基因組拷貝數(shù),結(jié)果顯示,接毒后不同時(shí)間點(diǎn)均能檢測到TGEV病毒核酸,其中,與接毒后6和12 h相比,24 h的病毒基因組拷貝數(shù)顯著升高,且24 h后病毒基因組拷貝數(shù)均處于相同數(shù)量級,表明接毒24 h是收集細(xì)胞樣本以評估TGEV對IPEC-J2影響的最佳時(shí)間節(jié)點(diǎn)。
APN是一種鋅離子依賴性Ⅱ型跨膜金屬糖蛋白,隸屬于金屬蛋白酶M1家族,1963年首次由Pfleiderer和Celliers從豬腎中分離出來[37],廣泛分布于哺乳動(dòng)物不同器官和組織中,具有廣泛的生物學(xué)功能。pAPN在豬小腸粘膜細(xì)胞、腎臟刷狀緣膜和肝臟中高度表達(dá)[38]。研究發(fā)現(xiàn),pAPN是TGEV的關(guān)鍵細(xì)胞受體,TGEV通過其S蛋白附著到宿主細(xì)胞表面的pAPN上進(jìn)入宿主細(xì)胞[39]。敲除病毒宿主受體可能是研究宿主細(xì)胞反應(yīng)的分子機(jī)制和加速家畜抗病育種進(jìn)程的有效策略[40]?;蚓庉嫾夹g(shù)可刪減、插入或替換基因序列,實(shí)現(xiàn)對目標(biāo)基因的精準(zhǔn)編輯。CRISPR/Cas9系統(tǒng)因具有組成較為簡單、編輯效率高等優(yōu)點(diǎn),已經(jīng)成為目前應(yīng)用最多的基因編輯技術(shù),被廣泛應(yīng)用于提高家畜繁殖效率[41-42]、生產(chǎn)性能[43-44]、抗病性以及動(dòng)物模型構(gòu)建等研究[24,40,45-46]。其中,gRNA作為該系統(tǒng)的核心組成,能夠幫助Cas蛋白準(zhǔn)確定位到需要編輯的基因組區(qū)域,在基因編輯中起引導(dǎo)作用,同時(shí)gRNA的精確性與基因編輯的效率和安全性密切相關(guān)[47]。因此,設(shè)計(jì)高效且脫靶效應(yīng)低的gRNA對于后續(xù)的試驗(yàn)是至關(guān)重要的。本研究首先對王曉朋等[32]利用CRISPR/Cas9技術(shù)構(gòu)建pAPN基因敲除IPEC-J2的gRNA進(jìn)行脫靶位點(diǎn)預(yù)測,并對其潛在的脫靶位點(diǎn)附近DNA序列進(jìn)行PCR擴(kuò)增及測序。結(jié)果表明,IPEC-J2-KO與IPEC-J2-WT的DNA序列完全一致,未發(fā)現(xiàn)脫靶效應(yīng),證明構(gòu)建IPEC-J2-KO所用gRNA準(zhǔn)確度和安全性較高。
病毒的感染特征分析對于理解宿主-病原體相互作用機(jī)制具有重要意義[48]。TGEV-N蛋白編碼基因高度保守,針對TGEV-N基因保守序列設(shè)計(jì)特異性引物建立的qPCR檢測方法,不僅可用于表征感染細(xì)胞中TGEV的拷貝數(shù),也可用于臨床快速診斷和實(shí)驗(yàn)室檢測[49]。同時(shí),TGEV-N蛋白是感染細(xì)胞中含量最多的病毒結(jié)構(gòu)蛋白之一,可作為早期檢測及診斷TGEV感染的理想靶抗原[50]。近些年,利用CRISPR/Cas9系統(tǒng)構(gòu)建的pAPN基因敲除動(dòng)物模型在活體中被證實(shí)均可抵抗TGEV的感染[24,51],進(jìn)一步證實(shí)了pAPN在TGEV感染中的重要作用。因此,為深入了解pAPN基因在IPEC-J2介導(dǎo)TGEV感染過程中的作用,本研究對IPEC-J2-KO介導(dǎo)的TGEV感染特征進(jìn)行了分析。結(jié)果表明,與IPEC-J2-WT組相比,接毒后的IPEC-J2-KO中TGEV基因組拷貝數(shù)極顯著降低,且未檢測到TGEV-N蛋白的表達(dá),證明IPEC-J2-KO可抵抗TGEV的感染。除此之外,TCID50試驗(yàn)是一種可用于測定病毒在細(xì)胞培養(yǎng)物中感染能力和活性水平的方法。TCID50試驗(yàn)中常用的細(xì)胞是LLC-PK1。LLC-PK1是豬腎上皮細(xì)胞,對所有腸道冠狀病毒均具有易感性,是常用的腸道冠狀病毒體外感染的細(xì)胞模型[52],TGEV在該細(xì)胞中增殖和感染效率更高。LLC-PK1在感染TGEV后會(huì)出現(xiàn)明顯的體積增大、變圓、成簇等細(xì)胞病變,易于試驗(yàn)觀察[52]。本研究也利用TCID50試驗(yàn)分析了IPEC-J2-WT和IPEC-J2-KO在接種TGEV后的病毒滴度變化。結(jié)果顯示,IPEC-J2-KO中病毒滴度與IPEC-J2-WT相比極顯著下降,這與之前的結(jié)果趨勢相符合一致。綜上所述,pAPN基因敲除的IPEC-J2可有效抵抗TGEV的感染。
小腸炎癥被認(rèn)為是TGEV感染發(fā)病機(jī)制中的核心事件,IPEC-J2在TGEV感染24 h內(nèi)會(huì)發(fā)生快速而廣泛的轉(zhuǎn)錄和代謝變化,炎癥相關(guān)通路和防御相關(guān)途徑也會(huì)被激活[53]。之前研究發(fā)現(xiàn),TGEV可通過NF-κB、Toll樣受體(toll-like receptors, TLR)、腫瘤壞死因子(tumor necrosis factor,TNF)等信號通路誘導(dǎo)炎癥反應(yīng)[54]。其中,NF-κB是炎癥反應(yīng)的關(guān)鍵轉(zhuǎn)錄因子,在多種炎癥性疾病中扮演重要角色[55]。NF-κB通路在TGEV感染的ST細(xì)胞和IPEC-J2細(xì)胞中均能被激活,并導(dǎo)致促炎細(xì)胞因子表達(dá)上調(diào)[27]。此外,研究顯示TGEV誘導(dǎo)的NF-κB活性受相關(guān)基因的表達(dá)調(diào)控,如沉默早幼粒細(xì)胞白血病(promyelocytic leukemia,PML)基因的表達(dá)可以挽救TGEV誘導(dǎo)的NF-κB活性[56]。NF-κB p65磷酸化是NF-κB通路的一個(gè)重要指標(biāo),可以反映該通路的活性水平[57-58]。為了評估TGEV感染對IPEC-J2中先天免疫相關(guān)信號通路中轉(zhuǎn)錄因子NF-κB活性的影響,本研究檢測了NF-κB p65及其磷酸化蛋白pp65的表達(dá)情況。結(jié)果顯示,與Mock組相比,接毒后,IPEC-J2-WT中NF-κB p65磷酸化水平極顯著的升高,而IPEC-J2-KO中無顯著變化,表明接種TGEV未影響IPEC-J2-KO中先天免疫相關(guān)信號通路中轉(zhuǎn)錄因子NF-κB的活性,推測可能是因?yàn)閜APN基因的敲除導(dǎo)致TGEV無法進(jìn)入細(xì)胞,從而未引起NF-κB活性的變化。
4 結(jié) 論
本研究在IPEC-J2上進(jìn)行了TGEV感染特征分析,證實(shí)了IPEC-J2-KO在接毒后可有效抵抗TGEV的感染,且未影響NF-κB p65磷酸化水平,為闡明pAPN基因在TGEV入侵宿主細(xì)胞的機(jī)制提供理論依據(jù),同時(shí)為研究抗病豬新品種奠定了堅(jiān)實(shí)基礎(chǔ)。
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(編輯 郭云雁)