摘""要:MLO基因是植物中特有的一類抗病性負(fù)調(diào)控因子,該基因突變導(dǎo)致植物產(chǎn)生廣譜抗病性。本研究從木薯全基因組中克隆獲得木薯MLO12基因的DNA和cDNA序列,并將其命名為MeMlLoO12。該基因全長3743"nt、編碼區(qū)(ORF)全長1728"nt,具有一個完整的開放閱讀框,含有15個外顯子和14個內(nèi)含子,編碼586個氨基酸,蛋白的分子質(zhì)量為67.2"kDa,等電點為8.85。該基因編碼的蛋白定位在內(nèi)質(zhì)網(wǎng)膜上,無信號肽,在23~45、74~96、161~183、285~307、312~334、371~393、413~435"aa處形成7次跨膜結(jié)構(gòu)域。qRT-PCR定量分析發(fā)現(xiàn),受木薯黃單胞病菌侵染后,MeMloLO12基因在木薯抗、感品種中的表達量存在明顯的差異,參與木薯與黃單胞菌之間的互作,表現(xiàn)出負(fù)調(diào)控作用。選擇該基因第11個外顯子進行Snap"Gene"Viewer分析,獲得了10"455條sgRNA的種子序列,從中選取3條靶序列約23"nt,堿基組成上3¢末端含G結(jié)尾,將其構(gòu)建到CRISPR/-Cas9載體上,經(jīng)驗證,確認(rèn)MeMloLO12的3條靶序列已經(jīng)成功構(gòu)建到基因編輯載體上,將其命名為pSGR-Cas9-AT-MeMLO12載體。
關(guān)鍵詞:木薯;MeMloLO12基因;克?。槐磉_分析;CRISPR-Cas9載體;構(gòu)建中圖分類號:S533""""""文獻標(biāo)志碼:A
Cloning"of"Cassava"MeMLO12"Gene"and"Construction"of"Its"CRISPR-"Cas9"Expression"Vector
CAI"Jimiao,"LI"Boxun*,"HUANG"Guixiu,"LI"Chaoping,"SHI"Tao,"WANG"Guofen
1."Environment"and"Plant"Protection"Institute,"Chinese"Academy"of"Tropical"Agricultural"Sciences"/"Key"Laboratory"of"Integrated"Pest"Management"on"Tropical"Grops,"Ministry"of"Agriculture"and"Rural"Affairs,"China"/"Hainan"Engineering"Research"Center"for"Biological"Control"of"Tropical"Crops"Diseases"and"Insect"Pest,"Haikou,"Hainan"571101,"China
Abstract:"MLO"gene"is"an"unique"negative"regulatory"factor"for"disease"resistance"in"plants,"and"the"mutation"in"the"gene"can"lead"to"broad-spectrum"disease"resistance"in"plants."In"this"study,"a"DNA"and"cDNA"sequence"of"cassava"MLO12"gene"were"cloned"from"the"entire"cassava"genome"and"named"MeMloLO12."This"gene"has"a"total"length"of"3743"nt"and"a"coding"region"(ORF)"of"1728"nt,"with"a"complete"open"reading"frame"containing"15"exons"and"14"introns,"encoding"586"amino"acids."The"protein"has"a"molecular"weight"of"67.2"kDa"and"an"isoelectric"point"of"8.85."MeMloLO12"protein"is"located"on"the"endoplasmic"reticulum"membrane,"without"signal"peptides,"and"forms"seven"transmembrane"domains"at"23?45,"74?96,"161?183,nbsp;285?307,"312?334,"371?393,"413?435"aa."Quantitative"analysis"by"qRT"PCR"revealed"significant"differences"in"the"expression"of"MeMloLO12"gene"in"resistant"and"susceptible"cassava"germplasms"after"infection"with"Xanthomonas"axonopodis,"indicating"a"negative"regulatory"effect"in"the"interaction"between"cassava"and"Xam."Selecting"the"11th"exon"of"the"gene"for"Snap"Gene"Viewer"analysis,"10"455"seed"sequences"of"sgRNA"were"obtained."Three"target"sequences"of"approximately23nt"were"selected,"with"a"G"terminus"at"the"3¢"end"of"the"base"composition,"and"they"were"constructed"onto"the"CRISPR/-Cas9"vector."After"verification,"it"was"confirmed"that"the"three"target"sequences"of"MeMloLO12"have"been"successfully"constructed"onto"the"gene"editing"vector,"named"pSGR-Cas9-AT-MeMLO12"vector.
Keywords:"cassava;"MeMlo12"gene;"cloning;"expression"analysis;"CRISPR-Cas9"vector;"construction
DOI:"10.3969/j.issn.1000-2561.2024.08.002
木薯(Manihot"esculenta"Crantz)是世界熱帶、亞熱帶國家和地區(qū)的糧食作物,也是我國重要的熱帶工業(yè)原料作物,在保障糧食和能源安全以及熱帶農(nóng)產(chǎn)品國際貿(mào)易等方面占有重要地位[1]。細(xì)菌性萎蔫?。–asssva"Becterial"Blight,,"CBB)是為害木薯最為嚴(yán)重的葉部病害之一,在木薯整個生長季節(jié)均可發(fā)生,主要為害葉片和莖桿,能導(dǎo)致葉片大面積凋萎、干枯脫落,高溫高濕且臺風(fēng)雨頻繁的區(qū)域發(fā)病最為嚴(yán)重[2]。其病原地毯草黃單胞木薯萎蔫致病變種(Xanthomonas"axonopodis"pv"manihotis)于2007年被列入《中華人民共和國進境植物檢疫性有害生物名錄》,是國內(nèi)檢疫性對象。研究發(fā)現(xiàn),該病菌已經(jīng)對銅基殺菌劑產(chǎn)生一定程度的抗藥性[3],常規(guī)的化學(xué)藥劑如春雷霉素、氫氧化銅、硫酸鏈霉素,以及新型免疫誘抗劑氨基寡糖素等對該病的防效也均不理想[4-5],。木薯封行后,在高溫高濕和臺風(fēng)雨季節(jié)發(fā)病最為嚴(yán)重,這個時候進行人工施藥也比較困難,勞動力成本高,容易加重抗藥性的風(fēng)險[6]。前期研究發(fā)現(xiàn),國內(nèi)603份木薯種質(zhì)中有6份對該病表現(xiàn)出高抗水平[7],42份食用木薯種質(zhì)中也有4份表現(xiàn)出中抗水平[8],其余的均為感病種質(zhì),說明在我國木薯種質(zhì)資源中,存在一定數(shù)量的抗病種質(zhì)材料,并且這些抗、感種質(zhì)在田間種植過程中也都會感染細(xì)菌性萎蔫病,只是抗病種質(zhì)的病情指數(shù)和受害程度要低于感病種質(zhì),在發(fā)病高峰期,抗病種質(zhì)的落葉量在10%~20%之間,而感病種質(zhì)的落葉量高達60%,并且抗病種質(zhì)的最終產(chǎn)量也顯著高于同期的感病種質(zhì)(內(nèi)容資料尚未待發(fā)表)。因此,對于多年生、非精細(xì)化管理的木薯來說,抗病種質(zhì)的選育才是解決該病最為經(jīng)濟有效的途徑,而抗病基因資源的挖掘與利用是抗病種質(zhì)鑒選及創(chuàng)制利用的關(guān)鍵。
MLO是一類參與植物多種生物與非生物脅迫反應(yīng)的廣譜抗病因子,是由單基因控制的隱性抗病基因,在植物的抗病過程起負(fù)調(diào)控作用,目前已有198個植物MLO基因被克隆鑒定[9]。MLO是一種跨膜蛋白,有7個跨膜螺旋結(jié)構(gòu)域,定位在細(xì)胞膜上[10],在距離第7個跨膜結(jié)構(gòu)域的10~15個氨基酸處有1個鈣調(diào)素結(jié)合蛋白區(qū)域[11]。目前,已經(jīng)證明大麥(Hordeum"vulgare)[12]、番茄(Solanum"lycopersicum)[13]、擬南芥(Arabidopsis"thaliana)[14]中MLO基因的突變體是對白粉病菌具有廣譜抗性,缺失MLO基因的隱性突變對白粉菌不同生理小種具有廣譜、高效和持久抗性,是白粉病抗病性的負(fù)調(diào)控基因[15]。除白粉病外,MLO"還參與稻瘟菌、銹菌、卵菌、黃單胞菌等各種生物和非生物脅迫響應(yīng)[16-19]。覃碧等[20]從木薯全基因組數(shù)據(jù)庫中鑒定出21個MLO家族基因,劃分為6個遺傳類群,其中MeMLOloLO1、MeMLOloLO2、MeMLOloLO3、MeMLOloLO6、MeMLOloLO12和MeMLOloLO17等6個家族基因含有與抗病性相關(guān)的兩段保守結(jié)構(gòu)域和鈣素結(jié)合區(qū),可能與抗病性相關(guān)。在橡膠樹中HbMLO9、HbMLO12參與橡膠樹的激素信號傳導(dǎo)和逆境脅迫響應(yīng)過程[21-22],而HbMLO12沉默可以抑制白粉菌的侵染,并在與橡膠樹和白粉菌互作過程中提高了橡膠樹的免疫反應(yīng)[23],說明MLO12基因可能參與抗病性相關(guān)反應(yīng)。研究發(fā)現(xiàn),通過基因編輯對MLO相關(guān)等位基因進行定點突變可創(chuàng)制廣譜抗白粉病又高產(chǎn)的優(yōu)質(zhì)小麥新種質(zhì)[24],通過對感病S基因的突變來提高作物對病原菌的抗性,獲得廣譜和持久抗性的新種質(zhì)材料,是目前作物抗病育種研究的焦點。為此,本研究對木薯MLO家族中與抗病性相關(guān)的MLO12基因進行全長克隆和表達特性分析。同時以MeMLO12基因為靶點,構(gòu)建了1個sgRNA表達盒的CRISPR/Cas9載體pSGR-Cas9-AT-MeMLO12,證明了載體的有效性,為后續(xù)轉(zhuǎn)基因木薯的突變情況及、遺傳穩(wěn)定性分析以及抗病木薯新種質(zhì)材料的創(chuàng)制提供新的途徑。
1.1""材料
1.1.1""供試病原菌和載體""供試木薯黃單胞菌株GX11由中國熱帶農(nóng)業(yè)科學(xué)院環(huán)境與植物保護研究所的黃貴修研究團隊分離、鑒定和保存[3]。用于基因編輯的pSGR-Cas9-AT載體是由中國科學(xué)院分子植物科學(xué)卓越創(chuàng)新中心張鵬研究員提供。
1.1.2""供試木薯種質(zhì)材料""供試的9份木薯種質(zhì)HN8、HN12、HN18、GR4、GXC09、H1701、CP1、SC8、SC205均來自中國熱帶農(nóng)業(yè)科學(xué)院環(huán)境與植物保護研究所演豐基地木薯種質(zhì)保存圃,其中HN8、HN12、HN18、GXC09、H1701、CP1為本實驗室有性雜交獲得的對細(xì)菌性萎蔫病具有一定抗性的木薯種質(zhì);GR4、SC8、SC205是生產(chǎn)上普遍種植的感病木薯品種,均采用常規(guī)的起壟種植方法。
1.1.3""試劑和耗材""用于MLO12基因克隆和實施熒光定量表達分析的引物(表1)均由深圳華大基因科技有限公司合成;PCR擴增反應(yīng)所需的Buffer、Taq"DNA聚合酶、dNTPs、DNA"marker等生物學(xué)試劑,以及植物總RNA提取試劑盒(DP441)、FastQuant"cDNA第一鏈合成試劑盒(KR106)、SYBR"Green"SuperReal熒光定量預(yù)混試劑(FP205)均購自天根生化(北京)科技有限公司。E.Z.N.A."Gel"Extraction"Kit(D2500-01)膠回收試劑盒購自O(shè)mega"Bio-Tek公司,其他化學(xué)試劑、藥品等均為國產(chǎn)分析純。
1.1.4""儀器設(shè)備""Bio-Rad"T100型梯度PCR儀,美國伯樂公司;UVI"FireReader凝膠成像系統(tǒng),英國UVItec公司;ABI實時熒光定量PCR儀7500型,美國ABI公司。
1.2""方法
1.2.1""總RNA提取及反轉(zhuǎn)錄""參照RNA提取試劑盒說明書,對抗、感木薯葉片的總RNA進行提取。參照FastQuant"cDNA第一鏈合成試劑盒說明書對RNA進行反轉(zhuǎn)錄第一鏈,反轉(zhuǎn)錄產(chǎn)物于?20"℃冰箱保存。
1.2.2""基因克隆""將同屬大戟科的橡膠樹HbM L O 12基因序列(GenBank登錄號:XP_021673570)
在木薯全基因組數(shù)據(jù)庫中進行blastn比對,獲得的序列在Softberry服務(wù)器(http://www."softberry."com)在線軟件中選用已知的模式植物全基因組
序列,對基因全長進行預(yù)測,獲得MLO12基因的cDNA和基因組序列。根據(jù)預(yù)測結(jié)果,設(shè)計簡并引物MeMLO12-F和MeMLO12-R(表1),分別用以木薯種質(zhì)HN8葉片DNA和總RNA為模板,采用PCR和RT-PCR方法對基因全長進行克隆。擴增產(chǎn)物經(jīng)1.0%的瓊脂糖凝膠電泳檢測,獲得目的片段經(jīng)凝膠回收純化試劑盒回收,連接到pMD18-T載體上送深圳華大基因科技有限公司測序。
1.2.3""序列分析""利用DNAMAN"Version"5.2.2軟件分析目的基因編碼的氨基酸序列,使用ProtParam服務(wù)器(http://www.expasy.org/tools/protparam."html)在線軟件預(yù)測蛋白質(zhì)的相關(guān)信息,TMHMM-2.0(http://www.cbs.dtu.dk/services/)在線軟件預(yù)測蛋白質(zhì)跨膜結(jié)構(gòu)域。同時,下載近源物種的同源基因氨基酸序列,用MEGA"version"6.0軟件中的NJ(Neighbor-Joining)方法生成系統(tǒng)發(fā)育樹,用Bootstrap方法對系統(tǒng)發(fā)育樹進行檢驗,1000次重復(fù)。
1.2.4""表達分析""參照SYBR"Green"SuperReal熒光定量試劑盒說明書,以組成型表達基因18s"rRNA為內(nèi)參基因,分析MeMLO12基因在木薯抗、感種質(zhì)受黃單胞菌(GX11)接種的不同時間段(12、24、48、72"h)的差異表達情況,以不接種病原菌清水處理的葉片作為對照。每個樣品均重復(fù)3次,在ABI"7500實時PCR儀上進行,采用2?ΔΔCT法進行分析。
1.2.5""靶點序列設(shè)計及基因編輯載體構(gòu)建""采用在線設(shè)計軟件CRISPR-P"v2.0[25],在MeMLO12基因保守區(qū)域設(shè)計3條sgRNA靶序列。合成靶點引物(表2),參照郭文雅等[26]的方法克隆基因編輯載體。菌液PCR篩選出陽性克隆后進行測序,測序正確的質(zhì)粒命名為pSGR-Cas9-AT-MeMLO12。
2.1""MeMLO12基因的克隆及表達特性分析
2.1.1""MeMLO12基因的克隆""以木薯種質(zhì)HN8葉片的DNA和cDNA為模板,用引物對MeMLO12-F/R進行PCR和RT-PCR擴增。擴增產(chǎn)物(圖1)經(jīng)測序和序列分析發(fā)現(xiàn),該基因全長3743"nt,編碼區(qū)(ORF)全長1728"nt,具有一個完整的開放閱讀框,含有15個外顯子和14個內(nèi)含子(圖2),編碼586個氨基酸,蛋白的分子質(zhì)量為67.2"kDa,等電點為8.85,將其命名為MeMLO12(GenBank登錄號:ON_624099)。
2.1.2""MeMLO12基因及其不同物種同源蛋白的聚類關(guān)系分析""從NCBI下載木薯MeMLO1(XP_"021613330)、MeMLO4(XP_021618110)、MeMLO09(XP_021614134)、MeMLO10(XP_021605658)、MeMLO11(XP_021608377)、MeMLO13(XP_"021616696),橡膠樹HbMLO8(XP_021687228)、HbMLO10(XP_021691439)、HbMLO12(XP_"021673570),擬南芥AtMLO12(BAF_00789),麻風(fēng)樹JcMloLO12(XP_012086496)和蓖麻RiMloLO12(XP_002533246)的蛋白氨基酸序列,采用NCBI"Consered"Domains進行保守結(jié)構(gòu)域的預(yù)測,結(jié)果發(fā)現(xiàn)MeMLO12蛋白在12~489"aa之間存在1個MLO家族保守結(jié)構(gòu)域(圖3)。將MeMLO12基因蛋白的氨基酸序列與這6種植物MLO基因蛋白的氨基酸序列共同構(gòu)建系統(tǒng)發(fā)育樹,結(jié)果顯示,不同物種的MLO蛋白具有很高的同源性,木薯MeMLO12基因與橡膠樹、麻風(fēng)樹、蓖麻、擬南芥的MLO12基因都聚在同一個小分支上,與同屬于大戟科的橡膠樹親緣關(guān)系最近;另外MeMLO12與木薯MLO家族的MeMLO1、MeMLO4、MeMLO09、MeMLO10也在同一個大分支上,屬于同一個類群,親緣關(guān)系也較近,而與木薯MeMLO4、MeMLO11、MeMLO13,分屬于不同的類群,親緣關(guān)系較遠(yuǎn)(圖4)。
2.1.3""MeMLO12基因的生物信息學(xué)分析""根據(jù)SPORT亞細(xì)胞定位分析發(fā)現(xiàn)MeMLO12基因編碼的蛋白定位在內(nèi)質(zhì)網(wǎng)膜上,無信號肽(圖5)。TMHMM預(yù)測MeMLO12蛋白分別在23~45、74~96、161~183、285~307、312~334、371~393、413~435"aa處形成7次跨膜結(jié)構(gòu)域(圖6),跨膜結(jié)構(gòu)域是參與細(xì)胞與外界通信的特殊整合膜蛋白,說明該蛋白在信號轉(zhuǎn)導(dǎo)中發(fā)揮獨特和重要的作用。
2.1.4""病原菌誘導(dǎo)對MeMLO12基因表達的影響""MLO基因是一類非常典型的感病基因,在寄主受病原菌侵染后起到負(fù)調(diào)控作用[9]。qRT-PCR結(jié)果發(fā)現(xiàn)(圖7),在供試的9份木薯種質(zhì)中,不同抗性水平的木薯種質(zhì)在接種0"h時MeMLO12基因表達量存在一定的差異,其中HN18"的表達量略高于其他種質(zhì)。以0"h作為對照,接種木薯黃單胞菌(GX11)均能誘導(dǎo)MeMLO12基因表達量的變化,且不同抗、感種質(zhì)間的表達量和表達模式差異顯著。從表達模式上看HN8、HN12、RXC09、H1701、CP1、SC205和GR4基本一致,黃單胞菌(GX11)接種12"h時MeMLO12基因的表達量比對照略有升高,之后呈逐漸上升的趨勢,直至48"h時表達量達到峰值,接種72"h后又逐漸下降,其中HN8、HN12、RXC09和H1701等4個抗病種質(zhì)的相對表達量顯著高于感病種質(zhì)SC205、GR4和SC8。而HN18和SC8兩個種質(zhì)的表達模式又不同于其他種質(zhì)的表達模式,HN18在接種12"h時其表達就達到了峰值,24"h后表達量呈逐漸下降趨勢,72"h表達量最低;而SC8在接種24"h時表達量達到峰值,48"h后表達量顯著下降。說明不同抗性水平的木薯種質(zhì)中MeMLO12基因會隨著病程的發(fā)展而呈現(xiàn)出不同的表達模式,在病原菌侵染初期,不論抗病種質(zhì)還是感病種質(zhì),MeMLO12基因的表達量均會略有升高,此時也啟動了寄主的免疫反應(yīng)來抑制病原菌的進一步侵染,隨著病原菌和寄主之間相互作用增強,其表達量也達到峰值,接種72"h后均呈下降趨勢,進一步推測MeMLO12基因可能參與木薯和黃單胞菌之間的互作,然而這種調(diào)控作用如何發(fā)揮還有待進一步研究。
2.2""木薯MeMlo12基因CRISPR/-Cas9敲除載體構(gòu)建
2.2.1""sgRNA靶點選擇及其寡核苷酸鏈的合成""通過生物信息學(xué)分析,選擇該基因第11個外顯子進行Snap"Gene"Viewer的分析,獲得了10"455條sgRNA的種子序列。通過對mismatchPos、mitOfftargetScore、cfdOfftargetScore分值的評價,保證靶點特異性,降低脫靶效應(yīng)。從候選的sgRNA的種子序列優(yōu)選了3條靶序列(表2),每條靶序列23"nt,堿基組成上3'末端含G結(jié)尾,將其構(gòu)建到CRISPR/-Cas9載體上。
用BbsⅠ對pSGR-Cas9-AT表達載體進行酶切,切膠回收,將sgRNA引物退火合成雙鏈,用T4連接酶將雙鏈sgRNA連接到pSGR-Cas9-AT載體上,片段約8000"nt(圖8),轉(zhuǎn)化DH5α(Amp+),用M13F/oligo"2引物對擴增sgRNA表達框載體,得到約350"nt的片段,經(jīng)測序片段序列與預(yù)期一致(圖9)。
2.2.2"nbsp;pSGR-Cas9-AT重組質(zhì)粒的驗證""將轉(zhuǎn)化DH5α的陽性克隆送測序,測序結(jié)果用MEGA6.0軟件進行比對,比對結(jié)果顯示3條靶序列均已成功構(gòu)建到預(yù)期的靶點位置上(圖10)。將測序正確的質(zhì)粒進行Cas9元件的擴增,獲得了250"nt左右的片段,與預(yù)期目的片段大小一致(圖11)。對已構(gòu)建好的靶序列載體進行測序,確認(rèn)MeMloLO12的3條靶序列已經(jīng)成功構(gòu)建到基因編輯載體上,將其命名為pSGR-Cas9-AT-MeMLO12載體(圖12)。
MLO基因是植物特有的一類感病S基因與植物的感病性有關(guān),負(fù)調(diào)控植物的抗病過程。S感病基因功能的喪失會使植物獲得隱性遺傳抗性,其等位基因也正好彌補了抗病R基因抗性上的缺點,具有與R基因不同的抗病模式[27]。研究發(fā)現(xiàn)MLO蛋白定位在細(xì)胞膜上,中心疏水區(qū)域具有7個跨膜結(jié)構(gòu)域,其N端在細(xì)胞外,通常是與配體結(jié)合,C端在細(xì)胞內(nèi)與G蛋白結(jié)合[28]。MLO家族基因在信號肽上存在一定差異,覃碧等[20]發(fā)現(xiàn),木薯MeMLO8、MeMLO10和MeMLO18三個家族成員各有1個N端信號肽,這些信號肽均與第1次跨膜結(jié)構(gòu)存在重疊區(qū),而本研究中的MeMLO12基因沒有信號肽,有別于其他家族成員。MLO基因廣泛參與植物多種生物和非生物脅迫反應(yīng),在白粉菌侵染早期協(xié)助病原菌入侵寄主植株,調(diào)節(jié)寄主表皮細(xì)胞內(nèi)乳突的形成,在侵染位點抑制細(xì)胞壁產(chǎn)生H2O2,利于病原菌侵入,削弱了植物的防御能力[29-30]。當(dāng)MLO基因缺失或突變,將解除了對白粉菌的抗性和細(xì)胞死亡的負(fù)調(diào)控,使植物產(chǎn)生了對白粉病持久、高效和廣譜抗性[31]。2014年,中國科學(xué)院遺傳與發(fā)育生物學(xué)研究所高彩霞課題組,利用TALENs基因組編輯技術(shù)首次在六倍體小麥中對MLO基因的3個拷貝同時進行了突變,獲得了對白粉病具有廣譜抗性的小麥材料,為植物抗病育種新材料或品種的創(chuàng)制提供了一個全新的思路和技術(shù)路線[32]。近些年通過基因編輯技術(shù)敲除MLO基因在很多植物如擬南芥、小麥、番茄等都通得到了對白粉病具有抗性的突變株[33-34],擴大了MLO基因的利用范圍。
細(xì)菌性萎蔫病是國內(nèi)木薯為害最為嚴(yán)重的病害,高溫高濕或臺風(fēng)雨后,能在短時間內(nèi)爆發(fā)流行,導(dǎo)致植株萎蔫枯死,造成嚴(yán)重的產(chǎn)量損失,病害的防治技術(shù)一直是制約木薯產(chǎn)業(yè)持續(xù)穩(wěn)定發(fā)展的瓶頸問題[2],傳統(tǒng)的銅基殺菌劑已經(jīng)對該病產(chǎn)生了抗藥性,不僅達不到預(yù)期防效,而且防治成本高,因此抗病種質(zhì)的鑒選與創(chuàng)制利用才是防治該病最有效且綠色環(huán)保的措施。然而,傳統(tǒng)的雜交育種周期長,需要多個世代,盡管目前有許多遺傳改良或基因修飾途徑,但均存在突變位點鑒定困難,基因表達不夠徹底,不能穩(wěn)定遺傳等諸多缺陷,而基因編輯技術(shù)相比于其他技術(shù)來說具有明顯的優(yōu)勢。另外,相較于抗病R基因,敲除感病S基因獲得的抗病性會更加持久,也更容易通過基因編輯技術(shù)操作[33]。所以利用基因編輯技術(shù)敲除植物的感病S基因來創(chuàng)制抗病新種質(zhì)是一條可靠的途徑。因此本研究對木薯MLO家族中與抗病性相關(guān)的MLO12基因進行了全長克隆和表達特性分析。同時以MeMLO12基因為靶點,構(gòu)建了1個sgRNA表達盒的CRISPR/-Cas9載體pSGR-Cas9-AT-MeMLO12,并證明了該載體的有效性,為后續(xù)轉(zhuǎn)基因木薯的突變情況及遺傳穩(wěn)定性分析以及抗病木薯新種質(zhì)材料的創(chuàng)制提供新的途徑。
參考文獻
[1]"曹升,"陳江楓,"黃富宇,"嚴(yán)華兵,"韋朝念,"李富山,"陸柳英,"覃夏燕,"陳會,"李恒銳."廣西木薯產(chǎn)業(yè)現(xiàn)狀分析及其發(fā)展建議[J]."南方農(nóng)業(yè)學(xué)報,"2021,"52(6):"1468-1476.CAO"S,"CHEN"J"F,"HUANG"F"Y,"YAN"H"B,"WEI"C"N,"LI"F"S,"LU"L"Y,"QIN"X"Y,"CHEN"H,"LI"H"R."Development"status"and"countermeasures"of"cassava"industry"in"Guangxi[J]."Journal"of"Southern"Agriculture,"2021,"52(6):"1468-1476."(in"Chinese)
[2]"黃貴修."中國木薯主要病蟲草害識別與防治[M]."北京:"中國農(nóng)業(yè)科學(xué)技術(shù)出版社,"2012.HUANG"G"X."Identification"and"control"of"main"diseases,"pests"and"weeds"of"cassava"in"China[M]."Beijing:"China"Agricultural"Science"and"Technology"Press,"2012."(in"Chinese)
[3]"時濤,"蔡吉苗,"李超萍,"黃潔,"黃貴修."木薯細(xì)菌性萎蔫病菌抗銅性評價及抗銅相關(guān)基因簇分子分析[J]."熱帶作物學(xué)報,"2017,"38(3):"529-540.SHI"T,"CAI"J"M,"LI"C"P,"HUANG"J,"HUANG"G"X."Sensitivity"evaluation"to"copper"and"molecule"analysis"of"copper"resistance"related"gene"clusters"for"xanthomonas"axonopodis"pv."Manihotis[J]."Chinese"Journal"of"Tropical"Crops,"2017,"38(3):"529-540."(in"Chinese)
[4]"盧昕,"李超萍,"時濤,"黃貴修."木薯細(xì)菌性枯萎病菌防控藥劑的篩選[J]."熱帶農(nóng)業(yè)科學(xué),"2013,"33(2):"53-56.LU"X,"LI"C"P,"SHI"T,"HUANG"G"X."Bactericide"screening"against"pathogen"of"cassava"bacterial"blight[J]."Chinese"Journal"of"Tropical"Agriculture,"2013,"33(2):"53-56."(in"Chinese)
[5]"徐春華,"時濤,"王國芬,"李超萍,"蔡吉苗,"黃貴修."4種新型藥劑對木薯細(xì)菌性萎蔫病防效評價[J]."熱帶農(nóng)業(yè)科學(xué),"2019,"39(5):"53-57.XU"C"H,"SHI"T,"WANG"G"F,"LI"C"P,"CAI"J"M,"HUANG"G"X."Evaluation"of"control"effect"of"four"new"pesticides"against"cassava"bacterial"blight[J]."Chinese"Journal"of"Tropical"Agriculture,"2019,"39(5):"53-57."(in"Chinese)
[6]"李超萍."國內(nèi)木薯病害調(diào)查與細(xì)菌性枯萎病防治技術(shù)研究[D]."??冢?海南大學(xué),"2011.LI"C"P."Investigation"of"cassava"diseases"and"study"on"control"techniques"of"bacterial"wilt"in"China[D]."Haikou:"Hainan"University,"2011."(in"Chinese)
[7]"盧昕,"李超萍,"時濤,"陳江莎,"黃貴修."國內(nèi)603份木薯種質(zhì)對細(xì)菌性枯萎病抗性評價[J]."熱帶農(nóng)業(yè)科學(xué),"2013,"33(4):"67-70,"90.LU"X,"LInbsp;C"P,"SHI"T,"CHEN"J"S,"HUANG"G"X."Resistance"evaluation"of"China’s"main"cassava"germplasms"against"bacterial"blight[J]."Chinese"Journal"of"Tropical"Agriculture,"2013,"33(4):"67-70,"90."(in"Chinese)
[11]"KIM"M"C,"LEE"S"H,"KIM"J"K,"CHUN"H"J,"CHOI"M"S,"CHUNG"W"S,"MOON"B"C,"KANG"C"H,"PARK"C"Y,"YOO"J"H."Mlo,"a"modulator"of"plant"defense"and"cell"death,"is"a"novel"calmodulin-binding"protein."Iisolation"and"characterization"of"a"rice"Mlo"homologue[J]."Journal"of"Biological"Chemistry,"2002,"277(22):"19304-19314.
[12]"SHIRASU"K,"NIELSEN"K,"PIFFANELLI"P,"OLIVER"R,"SCHULZE-LEFERT"P."Cell-autonomous"complementation"of"Mlo"resistance"using"a"biolistic"transient"expression"system[J]."The"Plant"Journal,"1999,"17(3):"293-299.
[13]"BAI"Y,"PAVAN"S"N"C,"ZHENG"Z,"ZAPPEL"N"F,"REINST ADLER"A,"LOTTI"C,"GIOVANNI"C"B,"RICCIARDI"L,"LINDHOUT"P,"VISSER"R"G"F,"THERES"K,"PANSTRUGA"R."Naturally"occurring"broad-spectrum"powdery"mildew"resistancenbsp;in"a"central"American"aomato"accession"is"caused"by"loss"of"Mlo"function[J]."Molecular"Plant-Microbe"Interactions,"2008,"21(1):"30-39.
[14]"CONSONNI"C,"HUMPHRY"M"E,"HARTMANN"H"A,"LIVAJA"M,"DURNER"J,"WESTPHAL"L,"VOGEL"J,"LIPKA"V,"KEMMERLING"B,"SCHULZE-LEFERT"P."Conserved"requirement"for"a"plant"host"cell"protein"in"powdery"mildew"pathogenesis[J]."Nature"Genetics,"2006,"38(6):"716-720.
[15]"BüSCHGES"R,"HOLLRICHER"K,"PANSTRUGA"R,"SIMONS"G,"WOLTER"M,"FRIJTERS"A,"VAN"D"R,"VAN"D"L"T,"DIERGAARDE"P,"GROENENDIJK"J."The"barley"Mlo"gene:"a"novel"control"element"of"plant"pathogen"resistance[J]."Cell,"1997,"88(5):"695-705.
[16]"GRUNER"K,"ESSER"T,"ACEVEDO-GARCIA"J,"FREH"M,"HABIG"M,"STRUGALA"R,"STUKENBROCK"E,"SCHAF FRATH"U,"PANSTRUGA"R."Evidence"for"allele-specific"levels"of"enhanced"susceptibility"of"wheat"mlo"mutants"to"the"hemibiotrophic"fungal"pathogen"Magnaporthe"oryzae"pv."Triticum[J]."Genes(Basel),"2020,"11(5):"517.
[17]"孫燕飛,"李延生,"夏寧,"張崗,"王俊美,"王曉杰,"魏國榮,"康振生."小麥TaMlo8基因的克隆及表達分析[J]."西北農(nóng)林科技大學(xué)學(xué)報(自然科學(xué)版),"2011,"39(10):"101-110.SUN"Y"F,"LI"Y"S,"XIA"N,"ZHANG"G,"WANG"J"M,"WANG"X"J,"WEI"G"R,"KANG"Z"S."Cloning"and"expression"analysis"of"a"gene"TaMlo8"in"wheat[J]."Journal"of"Northwest"Aamp;F"University"(Natural"Science"Edition),"2011,"39(10):"101-110."(in"Chinese)
[18]"KIM"D"S,"HWANG"B"K."The"pepper"MLO"gene,"CaMLO2,"is"involved"in"the"susceptibility"cell-death"response"and"bacterial"and"oomycete"proliferation[J]."Plant"Journal,"2012,"72(5):"843-855.
[19]"羅臻,"張敬澤,"胡東維."大麥Mlo近等基因系與葉枯病菌互作的細(xì)胞學(xué)研究[J]."植物病理學(xué)報,"2009,"39(1):"36-42.LUO"Z,"ZHANG"J"Z,"HU"D"W."Cytological"examination"on"interactions"between"Mlo"near-isogenic"lines"of"barley"and"their"leaf"blight"pathogen[J]."Acta"Phytopathologica"Sinica,"2009,"39(1):"36-42."(in"Chinese)
[20]"覃碧,"王萌,"劉巧玲,"鄭服叢,"張宇."木薯Mlo基因家族成員的鑒定及其序列特征分析[J]."植物生理學(xué)報,"2013,"49(10):"1057-1062.QIN"B,"WANG"M,"LIU"Q"L,"ZHENG"F"C,"ZHANG"Y."Identification"and"sequence"characterization"of"Mlo"gene"family"from"the"genome"of"Manihot"esculenta"Crantz[J]."Plant"Physiology"Journal,"2013,"49(10):"1057-1062."(in"Chinese)
[21]"張宇,"何海霞,"王萌,"潘敏,"李曉娜,"鄭服叢."巴西橡膠樹HbMlo9基因的功能[J]."吉林農(nóng)業(yè)大學(xué)學(xué)報,"2018,"40(2):"198-203.ZHANG"Y,"HE"H"X,"WANG"M,"PAN"M,"LI"X"N,"ZHENG"F"C."Functional"analysis"of"HbMlo9"in"Hevea"brasiliensis"Muell.Arg[J]."Journal"of"Jilin"Agricultural"University,"2018,"40(2):"198-203."(in"Chinese)
[22]"QIN"B,"WANG"M,"HE"H"X,"XIAO"H"X,"WANG"L"F."Identification"and"characterization"of"a"potential"candidate"Mlo"gene"conferring"susceptibility"to"powdery"mildew"in"rubber"tree[J]."Phytopathology,"2019,"109(7):"1236-1245.
[23]"LI"X,"ZHAO"W"Y,"ZHANG"Z"M,"FANG"Y"X,"DOMG"L"P,"YIN"J"Y,"LIU"Y"H,"CHEN"D"P,"LI"Z"G,"LiuIU"W"B,"LIN"C"H,"MIAO"W"G."The"rubber"tree"(Heveae"brasiliensis)"MLO"protein"HbMLO12"promotes"plant"susceptibility"to"sustain"infection"by"a"powdery"mildew"fungus[J]."Molecular"Plant-Microbe"Interactions,"2023,"36(5):"273-28l.
[24]"LI"S"G,"LIN"D"X,"ZHANG"Y"W,"DENG"M,"CHEN"Y"X,"LV"B,"LI"B"S,"LEI"Y,"WANG"Y"P,"ZHAO"L,"LIANG"Y"T,"LIU"J"X,"CHEN"K"L,"LIU"Z"Y,"XIAO"J,"QIU"J"L,"GAO"C"X."Genome-edited"powdery"mildew"resistance"in"wheat"without"growth"penalties[J]."Nature,"2022,"602(2):"455-460.
[25]"SAMANTA"M"K","DEY"A","GAYEN"S."CRISPR/Cas9:"an"advanced"tool"for"editing"plant"genomes[J]."Transgenic"Research,"2016,"25(5):"561-573.
[26]"郭文雅,"王海,"王亞杰,"張彤,"姚遠(yuǎn),"郭建春,"耿夢婷,"陳銀華."木薯MeWRKY12基因的CRISPR/Cas9基因編輯載體的構(gòu)建及驗證[J]."分子植物育種,"2022,"20(5):"1554-1559.GUO"W"Y,"WANG"H,"WANG"Y"J,"ZHANG"T,"YAO"Y,"GUO"J"C,"GENG"M"T,"CHEN"Y"H."Construction"and"verification"of"CRISPR/Cas9"gene"editing"vector"for"cassava"MeWRKY12"gene[J]."Molecular"Plant"Breeding,"2022,"20(5):"1554-1559."(in"Chinese)
[27]"田永賢,"陳敏,"王其剛,"張顥,"邱顯欽."植物抗白粉病MLO基因研究進展[J]."江蘇農(nóng)業(yè)科學(xué),"2020,"48(1):"44-54.TIAN"Y"X,"CHEN"M,"WANG"Q"G,"ZHANG"J,"QIU"X"Q."Research"progress"of"MLOlo"gene"for"resistance"to"powdery"mildew"in"plants[J]."Jiangsu"Agricultural"Science,"2020,"48(1):"44-54."(in"Chinese)
[28]"PIFFANELLI"P,"ZHOU"F,"CASAIS,"ORME"J,"JAROSCH"B,"SCHAFFRATH"U,"COLLINS"N"C,"PANSTRUGA"R,"LEFERT"S."The"barley"MLO"modulator"of"defense"and"cell"death"is"responsive"to"biotic"and"abiotic"stress"stimuli[J]."Plant"Physiology,"2002,"129(3):"1076-1085.
[29]"KUMAR"J,"HüCKELHOVEN"R,"BECKHOVE"U,"NAG A RAJAN"S,"KOGEL"K"H."A"compromised"Mlo"pathway"affects"the"response"of"barley"to"the"necrotrophic"fungus"Bipolaris"sorokiniana"(teleomorph:"Cochliobolus"sativus)"and"its"toxins[J]."Phytopathology,"2001,"91(2):"127-133.
[30]"DEVOVO"A,"HARTMANN"H"A,"PIFFANELLI"P,"EL L IOTT"C,"SIMMONS"C,"TARAMINO"G,"GOH"C"S,"COHEN"F"E,"EMERSON"B"C,"SCHULZE-LEFERT"P,"PANST RU GA"R."Molecular"phylogeny"and"evolution"of"the"plant-spec ific"seven-transmembrane"MloLO"Family[J]."Journal"of"Molecu lar"Evolution,"2003,"56(1):nbsp;77-88.
[31]"BUSCHGES"R,"HOLLRICHER"K,"PANSTRUGA"R,"SIMONS"G,"WOLTER"M,"FRIJTERS"A,"VAN"D"R,"VAN"D"T"L,"DIERGAARDE"P,"GROENENDIJK"J."The"barley"Mlo"gene:"a"novel"control"element"of"plant"pathogen"resistance[J]."Cell,"1997,"88(5):"695-705.
[32]"WANG"Y"P,"CHENG"X,"SHAN"Q"W,"ZHANG"Y,"LIU"J"X,"GAO"C"X,"QIU"J"L."Simultaneous"editing"of"three"homoeoalleles"in"hexaploid"bread"wheat"confers"heritable"resistance"to"powdery"mildew[J]."Nature"Biotechnology,"2014,"32(9):"947-951.
[33]"ZAIDI"S"S,"MUKHTAR"M"S,"MANSOOR"S."Genome"editing:"targeting"susceptibility"genes"for"plant"disease"resistance[J]."Trends"in"Biotechnology,"2018,"36(9):"898-906.
[34]"DONG"OLIVER"X,"RONALDDONG,"PAMELA"C,"RONALD."Genetic"engineering"for"disease"resistance"in"plants:"recent"progress"and"future"perspectives[J]."Plant"Physiology,"2019,"180(1):"26-38.